BIOSCAN biomonitoring workflow

Draft workflow illustration

The documentation for the development of BIOSCAN biomonitorig workflow

withing the framework of Biodiversity Genomics Europe (BGE).

This is work in progress…

Contents

• Sampling
  • Malaise trap
  • Water
  • Soil
  • Registering samples in PlutoF GO
• Sample prep. for DNA extraction
  • Malaise trap
  • Water
  • Soil
• DNA extraction
  • Water
  • Soil
  • Malaise trap sample
• Ampolicon lib. prep.
• Sequencing
• Bioinformatics
  • Arthropods/COI
  • Fungi/ITS
  • Bacteria/16S
• Interpretations
• Additional resources
• Changelog history
  • v0.1b [2023_12_31]

---